Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPX4Glutathione peroxidase 4. (168 aa)    
Predicted Functional Partners:
GSR
Glutathione-disulfide reductase.
   
 0.986
ENSAHAP00000025879
annotation not available
  
 0.963
PRDX6
Peroxiredoxin 6.
  
 0.948
GPX2
Glutathione peroxidase 2.
   
 
 0.942
GSTK1
Glutathione S-transferase kappa 1.
    
 0.941
GPX1
Glutathione peroxidase 1.
  
 
0.938
MGST1
Microsomal glutathione S-transferase 1.
     
 0.930
HPGDS
Hematopoietic prostaglandin D synthase.
   
 
 0.930
GSTO1
Glutathione S-transferase omega 1.
   
 0.927
ENSAHAP00000002694
annotation not available
  
  
0.925
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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