STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCBP1Nuclear cap binding protein subunit 1. (832 aa)    
Predicted Functional Partners:
NCBP3
Nuclear cap binding subunit 3.
    
 0.999
ENSAHAP00000023333
annotation not available
   
 0.999
ENSAHAP00000004089
annotation not available
    
 0.996
PHAX
Phosphorylated adaptor for RNA export.
   
 0.996
EIF4E
Eukaryotic translation initiation factor 4E.
    
 0.996
EIF4E1B
Eukaryotic translation initiation factor 4E family member 1B.
    
 0.996
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.995
EIF4E3
Eukaryotic translation initiation factor 4E family member 3.
    
 0.994
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 0.993
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
 0.993
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.