STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETFRF1Electron transfer flavoprotein regulatory factor 1. (88 aa)    
Predicted Functional Partners:
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
    
 
 0.987
ETFA
Electron transfer flavoprotein subunit alpha.
   
 
 0.983
MRPL46
Mitochondrial ribosomal protein L46.
    
   0.949
LYRM1
LYR motif containing 1.
      
 0.850
PALB2
Partner and localizer of BRCA2.
    
 
 0.793
LYRM7
LYR motif containing 7.
   
  
 0.665
ENSAHAP00000022604
annotation not available
      
 0.665
ENSAHAP00000004790
annotation not available
      
 0.657
PEX6
Peroxisomal biogenesis factor 6.
     
  0.610
ENSAHAP00000025163
annotation not available
      
 0.518
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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