STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001404annotation not available (1187 aa)    
Predicted Functional Partners:
ENSAHAP00000012789
annotation not available
    
 0.872
ENSAHAP00000012820
annotation not available
    
 0.872
RHOB
Ras homolog family member B.
    
 0.837
RHOA
Ras homolog family member A.
    
 0.837
ENSAHAP00000027164
annotation not available
    
 0.837
ENSAHAP00000002488
annotation not available
    
 0.829
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.736
CDC42
Cell division cycle 42.
   
 0.715
RND1
Rho family GTPase 1.
    
 0.714
RND3
Rho family GTPase 3.
    
 0.714
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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