STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001405annotation not available (513 aa)    
Predicted Functional Partners:
ENSAHAP00000023833
annotation not available
    
 0.699
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.668
ENSAHAP00000026137
annotation not available
   
  0.632
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.612
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
     
 0.599
PAXIP1
PAX interacting protein 1.
   
 0.586
FUT8
Fucosyltransferase 8.
     
 0.568
BRCA1
BRCA1 DNA repair associated.
    
 0.563
ENSAHAP00000010519
annotation not available
   
 0.553
BARD1
BRCA1 associated RING domain 1.
    
 0.534
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.