STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1LRPGRIP1 like. (1267 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
    
 0.999
NPHP1
Nephrocystin 1.
    
 0.999
RPGR
Retinitis pigmentosa GTPase regulator.
    
 
 0.980
NEK4
NIMA related kinase 4.
    
 
 0.895
TMEM67
Transmembrane protein 67.
   
  
 0.889
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
  
 0.837
AHI1
Abelson helper integration site 1.
     
 0.828
IFT88
Intraflagellar transport 88.
   
  
 0.826
TCTN1
Tectonic family member 1.
      
 0.815
TMEM216
Transmembrane protein 216.
      
 0.808
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.