Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLRBGlycine receptor beta. (488 aa)    
Predicted Functional Partners:
ENSAHAP00000001860
annotation not available
    
 
 0.964
ENSAHAP00000002074
annotation not available
    
 
 0.964
GLRA1
Glycine receptor alpha 1.
    
  0.942
GLRA3
Glycine receptor alpha 3.
    
  0.942
GLRA4
Glycine receptor alpha 4.
   
  0.893
GLRA2
Glycine receptor alpha 2.
   
  0.893
ARHGEF9
Cdc42 guanine nucleotide exchange factor 9.
      
 0.682
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.679
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4.
      
 0.664
KATNA1
Katanin catalytic subunit A1.
      
 0.661
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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