STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001427annotation not available (74 aa)    
Predicted Functional Partners:
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.999
RPA1
Replication protein A1.
    
 0.999
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.999
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.999
RPA3
Replication protein A3.
    
 0.998
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.998
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.996
FANCM
FA complementation group M.
    
 0.995
GTF2H5
General transcription factor IIH subunit 5.
    
 0.993
PRPF19
pre-mRNA processing factor 19.
    
 0.990
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.