STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DECR22,4-dienoyl-CoA reductase 2. (293 aa)    
Predicted Functional Partners:
NUDCD1
NudC domain containing 1.
    
   0.884
PEX5
Peroxisomal biogenesis factor 5.
    
 0.858
EHHADH
enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.
  
 0.857
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.822
ACAA1
acetyl-CoA acyltransferase 1.
  
 0.813
ECI2
enoyl-CoA delta isomerase 2.
  
 0.796
ECI1
enoyl-CoA delta isomerase 1.
  
 0.786
FCSK
Fucose kinase.
    
  0.771
MCAT
malonyl-CoA-acyl carrier protein transacylase.
  
 0.759
CRAT
Carnitine O-acetyltransferase.
   
 0.746
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.