STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASC1Cancer susceptibility 1. (599 aa)    
Predicted Functional Partners:
WDR63
WD repeat domain 63.
   
 0.974
NME8
NME/NM23 family member 8.
   
  0.964
WDR78
WD repeat domain 78.
   
 0.951
DNAI2
Dynein axonemal intermediate chain 2.
    
 0.948
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.906
CCDC65
Coiled-coil domain containing 65.
   
 0.905
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.901
CFAP44
Cilia and flagella associated protein 44.
    
 
 0.900
DRC1
Dynein regulatory complex subunit 1.
   
 0.892
ENSAHAP00000004318
annotation not available
    
   0.884
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.