Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001450annotation not available (74 aa)    
Predicted Functional Partners:
ENSAHAP00000015216
annotation not available
   
  
 0.633
ENSAHAP00000025528
annotation not available
      
 0.620
CHMP5
Charged multivesicular body protein 5.
      
 0.565
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.528
ENSAHAP00000022785
annotation not available
   
  
 0.508
HTRA1
HtrA serine peptidase 1.
    
 
 0.500
TMPRSS15
Transmembrane serine protease 15.
    
 0.479
ARHGEF39
Rho guanine nucleotide exchange factor 39.
      
 0.466
ATG16L1
Autophagy related 16 like 1.
      
 0.466
B4GALT1
Beta-1,4-galactosyltransferase 1.
      
 0.427
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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