STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRMPLymphoid restricted membrane protein. (517 aa)    
Predicted Functional Partners:
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.978
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.945
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.798
CLMN
Calmin.
    
  0.763
ENSAHAP00000013217
annotation not available
   
 0.636
ENSAHAP00000013224
annotation not available
   
 0.636
ENSAHAP00000013226
annotation not available
   
 0.636
PRKG2
Protein kinase cGMP-dependent 2.
   
 0.636
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.612
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.612
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.