STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFF2Trefoil factor 2. (145 aa)    
Predicted Functional Partners:
ENSAHAP00000025408
annotation not available
   
  
 0.792
ENSAHAP00000015216
annotation not available
   
  
 0.662
AGMO
Alkylglycerol monooxygenase.
      
 0.593
GKN2
Gastrokine 2.
   
  
 0.586
UBASH3A
Ubiquitin associated and SH3 domain containing A.
      
 0.570
CLPS
Colipase.
   
  
 0.556
ENSAHAP00000010858
annotation not available
   
  
 0.499
ENSAHAP00000008596
annotation not available
   
  
 0.496
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
      
 0.435
CLDN4
Claudin 4.
      
 0.434
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.