STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001495annotation not available (74 aa)    
Predicted Functional Partners:
TMEM167A
Transmembrane protein 167A.
   
 
 0.816
WDR26
WD repeat domain 26.
      
 0.808
YIPF5
Yip1 domain family member 5.
   
 
 0.785
YIPF7
Yip1 domain family member 7.
   
 
 0.724
TMCO1
Transmembrane and coiled-coil domains 1.
   
  
 0.684
ENSAHAP00000003288
annotation not available
   
    0.674
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.668
ENSAHAP00000003408
annotation not available
   
 
 0.664
SLC25A40
Solute carrier family 25 member 40.
      
 0.661
MTMR10
Myotubularin related protein 10.
      
 0.655
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.