STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX30SRY-box transcription factor 30. (778 aa)    
Predicted Functional Partners:
DMRT1
Doublesex and mab-3 related transcription factor 1.
    
 0.705
ENSAHAP00000016999
annotation not available
    
 0.677
RUNX2
RUNX family transcription factor 2.
   
 0.652
RUNX3
RUNX family transcription factor 3.
   
 0.652
RUNX1
RUNX family transcription factor 1.
   
 0.652
CTNNB1
Catenin beta 1.
    
 0.628
JUP
Junction plakoglobin.
    
 0.628
ENSAHAP00000003427
annotation not available
    
 0.608
ENSAHAP00000024369
annotation not available
    
 0.608
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
 0.594
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.