STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD54Ankyrin repeat domain 54. (180 aa)    
Predicted Functional Partners:
CDC23
Cell division cycle 23.
   
  0.822
CDC16
Cell division cycle 16.
    
  0.820
BRCA1
BRCA1 DNA repair associated.
    
  0.820
ANAPC4
Anaphase promoting complex subunit 4.
    
  0.820
ANAPC2
Anaphase promoting complex subunit 2.
    
  0.817
CBX8
Chromobox 8.
    
  0.816
CDC27
Cell division cycle 27.
   
  0.816
ANAPC7
Anaphase promoting complex subunit 7.
    
  0.814
ENSAHAP00000012007
annotation not available
    
  0.813
ENSAHAP00000019364
annotation not available
    
  0.809
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.