STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDHD2Haloacid dehalogenase like hydrolase domain containing 2. (301 aa)    
Predicted Functional Partners:
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
     
 0.802
ATP6V0B
ATPase H+ transporting V0 subunit b.
   
 
 0.783
ATP5F1C
ATP synthase F1 subunit gamma.
  
 
 0.782
ATP5F1D
ATP synthase F1 subunit delta.
  
 
 0.776
ENSAHAP00000026590
annotation not available
  
 
 0.773
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.770
ATP6V0C
ATPase H+ transporting V0 subunit c.
   
 
 0.761
ATP5PF
ATP synthase peripheral stalk subunit F6.
   
 
 0.759
ENSAHAP00000005338
annotation not available
   
 
 0.757
ATP5PD
ATP synthase peripheral stalk subunit d.
   
 
  0.753
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.