STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIA1Glutamate ionotropic receptor AMPA type subunit 1. (902 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.999
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.999
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
 0.998
ENSAHAP00000014296
annotation not available
   
 0.998
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
   
 0.996
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
    
 0.990
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.986
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
    
 0.984
PICK1
Protein interacting with PRKCA 1.
    
 0.982
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.976
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.