FBN1 protein (Apteryx haastii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

FBN1

Fibrillin 1. (2625 aa)

Predicted Functional Partners:

LUM

0.966

MMP15

0.906

DCN

0.906

MFAP2

0.887

FBN3

0.872

ENSAHAP00000023723

0.872

ENSAHAP00000023726

0.872

TGFB3

0.835

MFAP5

0.815

MYSM1

0.814

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCN	ENSAHAP00000023723	ENSAHAP00000024715	ENSAHAP00000023723	Decorin.	annotation not available	0.504
DCN	ENSAHAP00000023726	ENSAHAP00000024715	ENSAHAP00000023726	Decorin.	annotation not available	0.504
DCN	FBN1	ENSAHAP00000024715	ENSAHAP00000001510	Decorin.	Fibrillin 1.	0.906
DCN	FBN3	ENSAHAP00000024715	ENSAHAP00000013210	Decorin.	Fibrillin 3.	0.504
DCN	LUM	ENSAHAP00000024715	ENSAHAP00000024721	Decorin.	Lumican.	0.958
DCN	MMP15	ENSAHAP00000024715	ENSAHAP00000011632	Decorin.	Matrix metallopeptidase 15.	0.747
DCN	TGFB3	ENSAHAP00000024715	ENSAHAP00000013036	Decorin.	Transforming growth factor beta 3.	0.947
ENSAHAP00000023723	DCN	ENSAHAP00000023723	ENSAHAP00000024715	annotation not available	Decorin.	0.504
ENSAHAP00000023723	ENSAHAP00000023726	ENSAHAP00000023723	ENSAHAP00000023726	annotation not available	annotation not available	0.897
ENSAHAP00000023723	FBN1	ENSAHAP00000023723	ENSAHAP00000001510	annotation not available	Fibrillin 1.	0.872
ENSAHAP00000023723	LUM	ENSAHAP00000023723	ENSAHAP00000024721	annotation not available	Lumican.	0.755
ENSAHAP00000023723	MFAP2	ENSAHAP00000023723	ENSAHAP00000027925	annotation not available	Microfibril associated protein 2.	0.700
ENSAHAP00000023723	MFAP5	ENSAHAP00000023723	ENSAHAP00000010092	annotation not available	Microfibril associated protein 5.	0.547
ENSAHAP00000023723	MMP15	ENSAHAP00000023723	ENSAHAP00000011632	annotation not available	Matrix metallopeptidase 15.	0.683
ENSAHAP00000023723	MYSM1	ENSAHAP00000023723	ENSAHAP00000014031	annotation not available	Myb like, SWIRM and MPN domains 1.	0.814
ENSAHAP00000023723	TGFB3	ENSAHAP00000023723	ENSAHAP00000013036	annotation not available	Transforming growth factor beta 3.	0.743
ENSAHAP00000023726	DCN	ENSAHAP00000023726	ENSAHAP00000024715	annotation not available	Decorin.	0.504
ENSAHAP00000023726	ENSAHAP00000023723	ENSAHAP00000023726	ENSAHAP00000023723	annotation not available	annotation not available	0.897
ENSAHAP00000023726	FBN1	ENSAHAP00000023726	ENSAHAP00000001510	annotation not available	Fibrillin 1.	0.872
ENSAHAP00000023726	LUM	ENSAHAP00000023726	ENSAHAP00000024721	annotation not available	Lumican.	0.755