STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL4Ribosomal protein L4. (408 aa)    
Predicted Functional Partners:
RPS20
Ribosomal protein S20.
  
 0.999
RPLP0
Ribosomal protein lateral stalk subunit P0.
  
 0.999
RPL34
Ribosomal protein L34.
  
 0.999
RPL19
Ribosomal protein L19.
  
 0.999
RPS14
Ribosomal protein S14.
  
 0.999
ENSAHAP00000003310
annotation not available
  
 0.999
RPL21
Ribosomal protein L21.
  
 0.999
ENSAHAP00000004948
annotation not available
   
 0.999
RPS6
Ribosomal protein S6.
  
 0.999
RPS5
Ribosomal protein S5.
  
 0.999
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.