STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYTL5Synaptotagmin like 5. (683 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
    
 0.953
RAB27B
RAB27B, member RAS oncogene family.
    
 0.953
RAB3A
RAB3A, member RAS oncogene family.
   
 0.634
RAB3C
RAB3C, member RAS oncogene family.
   
 0.634
STXBP1
Syntaxin binding protein 1.
    
 0.629
RAB3B
RAB3B, member RAS oncogene family.
   
 0.627
ITSN2
Intersectin 2.
     
 0.602
TMEM104
Transmembrane protein 104.
      
 0.595
CSNK1A1
Casein kinase 1 alpha 1.
    
 
 0.581
TUBGCP2
Tubulin gamma complex associated protein 2.
    
 0.556
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.