STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMF1Polyamine modulated factor 1. (197 aa)    
Predicted Functional Partners:
DSN1
DSN1 component of MIS12 kinetochore complex.
    
 0.999
NSL1
NSL1 component of MIS12 kinetochore complex.
    
 0.998
NUF2
NUF2 component of NDC80 kinetochore complex.
    
 0.998
MIS12
MIS12 kinetochore complex component.
    
 0.998
SPC25
SPC25 component of NDC80 kinetochore complex.
   
  0.997
NDC80
NDC80 kinetochore complex component.
    
 0.996
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.995
ENSAHAP00000018883
annotation not available
    
 0.991
SKA3
Spindle and kinetochore associated complex subunit 3.
   
 0.983
SKA2
Spindle and kinetochore associated complex subunit 2.
     
 0.980
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.