Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXP2Forkhead box P2. (616 aa)    
Predicted Functional Partners:
FOXP4
Forkhead box P4.
    
 
 0.731
SATB2
SATB homeobox 2.
    
 
 0.682
RUNX2
RUNX family transcription factor 2.
    
 0.655
RUNX3
RUNX family transcription factor 3.
    
 0.655
TBR1
T-box brain transcription factor 1.
    
 
 0.655
RUNX1
RUNX family transcription factor 1.
    
 0.655
HTT
Huntingtin.
    
 
 0.646
NUMB
NUMB endocytic adaptor protein.
      
 0.638
CUX1
Cut like homeobox 1.
    
 
 0.636
CDC5L
Cell division cycle 5 like.
    
 
 0.636
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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