STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYBBCytochrome b-245 beta chain. (570 aa)    
Predicted Functional Partners:
NCF1
Neutrophil cytosolic factor 1.
   
 0.991
NCF4
Neutrophil cytosolic factor 4.
   
 0.989
NCF2
Neutrophil cytosolic factor 2.
   
 0.987
CYBA
Cytochrome b-245 alpha chain.
   
 0.980
NOX4
NADPH oxidase 4.
    
 0.976
NOX5
NADPH oxidase 5.
     
 0.970
NOX3
NADPH oxidase 3.
     
  0.970
NOX1
NADPH oxidase 1.
     
  0.970
DUOX2
Dual oxidase 2.
     
 0.970
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
   
 0.898
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.