STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSD3Nuclear receptor binding SET domain protein 3. (1437 aa)    
Predicted Functional Partners:
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.931
KMT5B
Lysine methyltransferase 5B.
   
 
 0.930
KMT2E
Lysine methyltransferase 2E.
   
 0.923
SMYD2
SET and MYND domain containing 2.
     
 0.919
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.909
CBX1
Chromobox 1.
    
 0.907
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.903
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.901
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.901
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.894
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.