STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001557annotation not available (847 aa)    
Predicted Functional Partners:
RPL8
Ribosomal protein L8.
 
 0.996
ENSAHAP00000004948
annotation not available
   
 0.994
RPS16
Ribosomal protein S16.
  
 0.994
RPL4
Ribosomal protein L4.
  
 0.993
RPL5
Ribosomal protein L5.
  
 0.992
RPS8
Ribosomal protein S8.
   
 0.992
ENSAHAP00000013827
annotation not available
  
 0.992
ENSAHAP00000018586
annotation not available
  
 0.992
RPS6
Ribosomal protein S6.
   
 0.991
RPSA
Ribosomal protein SA.
  
 0.991
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.