STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001560annotation not available (346 aa)    
Predicted Functional Partners:
SMAD4
SMAD family member 4.
    
 0.992
ENSAHAP00000005063
annotation not available
    
 0.979
SMAD5
SMAD family member 5.
    
 0.979
SMAD1
SMAD family member 1.
    
 0.979
SMAD6
SMAD family member 6.
     
  0.970
SMAD7
SMAD family member 7.
     
  0.970
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.967
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.967
SMAD3
SMAD family member 3.
    
 0.884
SMAD2
SMAD family member 2.
    
 0.878
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.