STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001564annotation not available (431 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
  0.565
RPP38
Ribonuclease P/MRP subunit p38.
    
  0.557
RPP40
Ribonuclease P/MRP subunit p40.
   
 
  0.512
POP5
POP5 homolog, ribonuclease P/MRP subunit.
     
  0.504
RPP30
Ribonuclease P/MRP subunit p30.
     
  0.504
POP1
POP1 homolog, ribonuclease P/MRP subunit.
     
  0.504
RPP25
Ribonuclease P and MRP subunit p25.
     
  0.504
POP4
POP4 homolog, ribonuclease P/MRP subunit.
     
  0.504
RPP25L
Ribonuclease P/MRP subunit p25 like.
     
  0.504
BARD1
BRCA1 associated RING domain 1.
    
  0.502
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.