STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001565annotation not available (98 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.988
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.984
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.948
GTF2B
General transcription factor IIB.
    
 0.933
GTF2A1
General transcription factor IIA subunit 1.
    
  0.870
GTF2A2
General transcription factor IIA subunit 2.
    
  0.870
TBPL2
TATA-box binding protein like 2.
    
 0.823
TBP
TATA-box binding protein.
    
 0.823
GTF2A1L
General transcription factor IIA subunit 1 like.
    
  0.818
TBPL1
TATA-box binding protein like 1.
    
 0.780
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.