STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001565annotation not available (98 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.999
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.998
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.998
GTF2B
General transcription factor IIB.
    
 0.946
POU2F1
POU class 2 homeobox 1.
    
  0.914
GTF2A1
General transcription factor IIA subunit 1.
    
  0.893
GTF2F2
General transcription factor IIF subunit 2.
    
  0.893
GTF2A2
General transcription factor IIA subunit 2.
    
  0.882
POLR2L
RNA polymerase II subunit L.
   
  0.876
POLR2K
RNA polymerase II subunit K.
    
  0.874
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.