Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001566annotation not available (99 aa)    
Predicted Functional Partners:
PARP1
poly(ADP-ribose) polymerase 1.
    
 
 0.823
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
   0.679
ADPRHL2
ADP-ribosylhydrolase like 2.
    
 
 0.628
OARD1
O-acyl-ADP-ribose deacylase 1.
    
 
 0.609
PARG
poly(ADP-ribose) glycohydrolase.
      
 0.593
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.592
ESR1
Estrogen receptor 1.
    
 
 0.569
AIFM1
Apoptosis inducing factor mitochondria associated 1.
  
 0.566
HDAC11
Histone deacetylase 11.
  
  0.557
TMX2
Thioredoxin related transmembrane protein 2.
   
  
 0.547
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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