HHIPL2 protein (Apteryx haastii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

HHIPL2

HHIP like 2. (671 aa)

Predicted Functional Partners:

ENSAHAP00000014538

0.521

MMP11

0.517

NTNG1

0.485

ANKRD1

0.470

ENSAHAP00000010519

0.466

TTLL4

0.462

WDR90

0.457

MRE11

0.452

PTK7

0.446

GAS1

0.443

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD1	HHIPL2	ENSAHAP00000005575	ENSAHAP00000001574	Ankyrin repeat domain 1.	HHIP like 2.	0.470
ANKRD1	MMP11	ENSAHAP00000005575	ENSAHAP00000016147	Ankyrin repeat domain 1.	Matrix metallopeptidase 11.	0.597
ANKRD1	MRE11	ENSAHAP00000005575	ENSAHAP00000023904	Ankyrin repeat domain 1.	MRE11 homolog, double strand break repair nuclease.	0.437
ANKRD1	PTK7	ENSAHAP00000005575	ENSAHAP00000010751	Ankyrin repeat domain 1.	Protein tyrosine kinase 7 (inactive).	0.528
ENSAHAP00000010519	HHIPL2	ENSAHAP00000010519	ENSAHAP00000001574	annotation not available	HHIP like 2.	0.466
ENSAHAP00000010519	MRE11	ENSAHAP00000010519	ENSAHAP00000023904	annotation not available	MRE11 homolog, double strand break repair nuclease.	0.999
ENSAHAP00000014538	HHIPL2	ENSAHAP00000014538	ENSAHAP00000001574	annotation not available	HHIP like 2.	0.521
ENSAHAP00000014538	NTNG1	ENSAHAP00000014538	ENSAHAP00000020480	annotation not available	Netrin G1.	0.742
ENSAHAP00000014538	PTK7	ENSAHAP00000014538	ENSAHAP00000010751	annotation not available	Protein tyrosine kinase 7 (inactive).	0.603
ENSAHAP00000014538	WDR90	ENSAHAP00000014538	ENSAHAP00000026577	annotation not available	WD repeat domain 90.	0.521
GAS1	HHIPL2	ENSAHAP00000001864	ENSAHAP00000001574	Growth arrest specific 1.	HHIP like 2.	0.443
HHIPL2	ANKRD1	ENSAHAP00000001574	ENSAHAP00000005575	HHIP like 2.	Ankyrin repeat domain 1.	0.470
HHIPL2	ENSAHAP00000010519	ENSAHAP00000001574	ENSAHAP00000010519	HHIP like 2.	annotation not available	0.466
HHIPL2	ENSAHAP00000014538	ENSAHAP00000001574	ENSAHAP00000014538	HHIP like 2.	annotation not available	0.521
HHIPL2	GAS1	ENSAHAP00000001574	ENSAHAP00000001864	HHIP like 2.	Growth arrest specific 1.	0.443
HHIPL2	MMP11	ENSAHAP00000001574	ENSAHAP00000016147	HHIP like 2.	Matrix metallopeptidase 11.	0.517
HHIPL2	MRE11	ENSAHAP00000001574	ENSAHAP00000023904	HHIP like 2.	MRE11 homolog, double strand break repair nuclease.	0.452
HHIPL2	NTNG1	ENSAHAP00000001574	ENSAHAP00000020480	HHIP like 2.	Netrin G1.	0.485
HHIPL2	PTK7	ENSAHAP00000001574	ENSAHAP00000010751	HHIP like 2.	Protein tyrosine kinase 7 (inactive).	0.446
HHIPL2	TTLL4	ENSAHAP00000001574	ENSAHAP00000014028	HHIP like 2.	Tubulin tyrosine ligase like 4.	0.462