Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTRR5-methyltetrahydrofolate-homocysteine methyltransferase reductase. (699 aa)    
Predicted Functional Partners:
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 0.999
SMS
Spermine synthase.
   
 
 0.967
ENSAHAP00000022461
annotation not available
      
 0.923
MTHFR
Methylenetetrahydrofolate reductase.
  
 
 0.922
MMADHC
Metabolism of cobalamin associated D.
     
 0.921
ENSAHAP00000019873
annotation not available
    
 0.913
SUOX
Sulfite oxidase.
     
 0.909
ENSAHAP00000010212
annotation not available
  
 0.864
ENSAHAP00000006336
annotation not available
      
 0.853
ENSAHAP00000002653
annotation not available
  
 
 0.848
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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