STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DUS1LDihydrouridine synthase 1 like. (400 aa)    
Predicted Functional Partners:
TRMT11
tRNA methyltransferase 11 homolog.
  
  
 0.907
TRMT12
tRNA methyltransferase 12 homolog.
   
  
 0.866
FLAD1
Flavin adenine dinucleotide synthetase 1.
   
 
 0.862
WDR36
WD repeat domain 36.
   
   0.829
PSMB1
Proteasome 20S subunit beta 1.
   
 
  0.770
TRMT2B
tRNA methyltransferase 2 homolog B.
  
  
 0.768
TRMT2A
tRNA methyltransferase 2 homolog A.
  
  
 0.768
NOC4L
Nucleolar complex associated 4 homolog.
   
    0.763
RPF1
Ribosome production factor 1 homolog.
   
    0.756
BYSL
Bystin like.
   
    0.753
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.