STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAN2poly(A) specific ribonuclease subunit PAN2. (1124 aa)    
Predicted Functional Partners:
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.999
EXOSC10
Exosome component 10.
  
 0.982
C1D
C1D nuclear receptor corepressor.
   
 0.978
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
   
 0.972
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
 0.972
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
   
 0.972
EXOSC3
Exosome component 3.
   
 
  0.971
EXOSC9
Exosome component 9.
   
 
  0.971
EXOSC2
Exosome component 2.
   
 
 0.971
EXOSC7
Exosome component 7.
     
  0.970
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.