STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR7Proline rich 7, synaptic. (193 aa)    
Predicted Functional Partners:
POLR3E
RNA polymerase III subunit E.
      
 0.660
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.592
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.583
NYAP2
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2.
      
 0.477
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
      
 0.477
FAF2
Fas associated factor family member 2.
      
 0.477
POLR3C
RNA polymerase III subunit C.
      
 0.475
TMED4
Transmembrane p24 trafficking protein 4.
      
 0.464
DNAJB13
DnaJ heat shock protein family (Hsp40) member B13.
      
 0.462
STEAP3
STEAP3 metalloreductase.
      
 0.435
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.