STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCKDHBBranched chain keto acid dehydrogenase E1 subunit beta. (375 aa)    
Predicted Functional Partners:
DBT
Dihydrolipoamide branched chain transacylase E2.
 
 0.998
ENSAHAP00000018233
annotation not available
 0.998
DLD
Dihydrolipoamide dehydrogenase.
  
 0.996
PPM1K
Protein phosphatase, Mg2+/Mn2+ dependent 1K.
   
 0.996
PDHX
Pyruvate dehydrogenase complex component X.
 
 0.994
DLAT
Dihydrolipoamide S-acetyltransferase.
 
 0.992
DLST
Dihydrolipoamide S-succinyltransferase.
 
 0.991
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
   
 0.966
BCAT1
Branched chain amino acid transaminase 1.
  
 0.965
ABHD11
Abhydrolase domain containing 11.
    
 0.935
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.