Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3BP1G3BP stress granule assembly factor 1. (465 aa)    
Predicted Functional Partners:
USP10
Ubiquitin specific peptidase 10.
   
 0.997
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.993
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.987
NUFIP2
Nuclear FMR1 interacting protein 2.
   
 
 0.982
DDX6
DEAD-box helicase 6.
   
 
 0.978
ATXN2
Ataxin 2.
   
 
 0.975
UPF1
UPF1 RNA helicase and ATPase.
    
 0.967
FMR1
FMRP translational regulator 1.
    
 
 0.959
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
    
 
 0.956
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.943
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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