STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDADC1Cytidine and dCMP deaminase domain containing 1. (630 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.837
ENSAHAP00000010864
annotation not available
    
 0.832
ENSAHAP00000010872
annotation not available
    
 0.832
TK1
Thymidine kinase 1.
  
 
 0.824
EPHX2
Epoxide hydrolase 2.
  
 
  0.759
ENSAHAP00000004230
annotation not available
  
 
 0.754
ENSAHAP00000002292
annotation not available
    
 0.706
ENSAHAP00000002303
annotation not available
    
 0.706
ENSAHAP00000014754
annotation not available
    
 0.706
UPP1
Uridine phosphorylase 1.
     
 0.701
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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