STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO1Establishment of sister chromatid cohesion N-acetyltransferase 1. (851 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.980
PDS5A
PDS5 cohesin associated factor A.
    
 0.931
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.909
PDS5B
PDS5 cohesin associated factor B.
   
 0.899
SMC2
Structural maintenance of chromosomes 2.
   
 0.891
SMC4
Structural maintenance of chromosomes 4.
   
 0.888
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.876
RAD21
RAD21 cohesin complex component.
   
 0.876
ENSAHAP00000017606
annotation not available
   
 0.875
SMC6
Structural maintenance of chromosomes 6.
   
 0.858
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.