STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ESCO1Establishment of sister chromatid cohesion N-acetyltransferase 1. (851 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.981
PDS5A
PDS5 cohesin associated factor A.
    
 0.962
PCNA
Proliferating cell nuclear antigen.
   
 0.948
PDS5B
PDS5 cohesin associated factor B.
   
 0.933
CHTF18
Chromosome transmission fidelity factor 18.
   
 
 0.929
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.924
WAPL
WAPL cohesin release factor.
   
 
 0.921
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.918
RAD21
RAD21 cohesin complex component.
   
 0.918
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
     
 0.893
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.