STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD3FAST kinase domains 3. (690 aa)    
Predicted Functional Partners:
FASTKD1
FAST kinase domains 1.
    
 
 0.903
ETFA
Electron transfer flavoprotein subunit alpha.
  
 0.743
FASTKD2
FAST kinase domains 2.
   
 
 0.722
MRPS31
Mitochondrial ribosomal protein S31.
    
 
 0.693
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
  
  
 0.688
ENSAHAP00000006413
annotation not available
      
 0.657
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.646
DHX30
DExH-box helicase 30.
    
 
 0.616
IARS2
isoleucyl-tRNA synthetase 2, mitochondrial.
  
 
 0.616
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.611
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.