STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIPINTIMELESS interacting protein. (282 aa)    
Predicted Functional Partners:
TIMELESS
Timeless circadian regulator.
   
 0.999
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
 0.994
GINS4
GINS complex subunit 4.
   
 
 0.991
RPA3
Replication protein A3.
   
 0.989
RPA1
Replication protein A1.
   
 0.988
PRIMPOL
Primase and DNA directed polymerase.
    
 
 0.986
ENSAHAP00000011196
annotation not available
   
 
 0.985
GINS1
GINS complex subunit 1.
   
 
 0.984
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.981
MCM5
Minichromosome maintenance complex component 5.
   
 
 0.972
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.