STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MBNL3Muscleblind like splicing regulator 3. (371 aa)    
Predicted Functional Partners:
ACOX1
acyl-CoA oxidase 1.
    
   0.725
CELF2
CUGBP Elav-like family member 2.
    
 
 0.704
CELF1
CUGBP Elav-like family member 1.
    
 
 0.703
MBNL1
Muscleblind like splicing regulator 1.
   
   0.685
ZCCHC13
Zinc finger CCHC-type containing 13.
    
 
 0.598
ENSAHAP00000025491
annotation not available
    
 
 0.581
RBM8A
RNA binding motif protein 8A.
    
 
 0.519
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 
 0.497
ENSAHAP00000020875
annotation not available
   
 
 0.497
ZNF609
Zinc finger protein 609.
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.