STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSCitrate synthase. (473 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase 2.
  
 0.998
ACO2
Aconitase 2.
  
 0.998
ENSAHAP00000005718
annotation not available
  
 0.995
ACLY
ATP citrate lyase.
  
 0.994
ACO1
Aconitase 1.
  
 0.994
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.994
FH
Fumarate hydratase.
  
 0.993
DLAT
Dihydrolipoamide S-acetyltransferase.
  
 0.993
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.993
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 0.991
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.