SCML2 protein (Apteryx haastii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SCML2

Scm polycomb group protein like 2. (610 aa)

Predicted Functional Partners:

ENSAHAP00000012007

0.978

CBX8

0.976

ENSAHAP00000003206

0.924

RNF2

0.924

PHC1

0.914

EED

0.907

CBX4

0.902

CBX2

0.901

EZH1

0.901

PCGF5

0.894

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX2	CBX4	ENSAHAP00000006764	ENSAHAP00000006787	Chromobox 2.	Chromobox 4.	0.998
CBX2	CBX8	ENSAHAP00000006764	ENSAHAP00000006770	Chromobox 2.	Chromobox 8.	0.996
CBX2	EED	ENSAHAP00000006764	ENSAHAP00000001546	Chromobox 2.	Embryonic ectoderm development.	0.981
CBX2	ENSAHAP00000003206	ENSAHAP00000006764	ENSAHAP00000003206	Chromobox 2.	annotation not available	0.983
CBX2	ENSAHAP00000012007	ENSAHAP00000006764	ENSAHAP00000012007	Chromobox 2.	annotation not available	0.997
CBX2	EZH1	ENSAHAP00000006764	ENSAHAP00000013023	Chromobox 2.	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.984
CBX2	PCGF5	ENSAHAP00000006764	ENSAHAP00000005567	Chromobox 2.	Polycomb group ring finger 5.	0.989
CBX2	PHC1	ENSAHAP00000006764	ENSAHAP00000006710	Chromobox 2.	Polyhomeotic homolog 1.	0.999
CBX2	RNF2	ENSAHAP00000006764	ENSAHAP00000004387	Chromobox 2.	Ring finger protein 2.	0.983
CBX2	SCML2	ENSAHAP00000006764	ENSAHAP00000001686	Chromobox 2.	Scm polycomb group protein like 2.	0.901
CBX4	CBX2	ENSAHAP00000006787	ENSAHAP00000006764	Chromobox 4.	Chromobox 2.	0.998
CBX4	CBX8	ENSAHAP00000006787	ENSAHAP00000006770	Chromobox 4.	Chromobox 8.	0.999
CBX4	EED	ENSAHAP00000006787	ENSAHAP00000001546	Chromobox 4.	Embryonic ectoderm development.	0.967
CBX4	ENSAHAP00000003206	ENSAHAP00000006787	ENSAHAP00000003206	Chromobox 4.	annotation not available	0.982
CBX4	ENSAHAP00000012007	ENSAHAP00000006787	ENSAHAP00000012007	Chromobox 4.	annotation not available	0.998
CBX4	EZH1	ENSAHAP00000006787	ENSAHAP00000013023	Chromobox 4.	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.986
CBX4	PCGF5	ENSAHAP00000006787	ENSAHAP00000005567	Chromobox 4.	Polycomb group ring finger 5.	0.986
CBX4	PHC1	ENSAHAP00000006787	ENSAHAP00000006710	Chromobox 4.	Polyhomeotic homolog 1.	0.999
CBX4	RNF2	ENSAHAP00000006787	ENSAHAP00000004387	Chromobox 4.	Ring finger protein 2.	0.989
CBX4	SCML2	ENSAHAP00000006787	ENSAHAP00000001686	Chromobox 4.	Scm polycomb group protein like 2.	0.902