STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POU6F2POU class 6 homeobox 2. (614 aa)    
Predicted Functional Partners:
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
  0.571
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
  0.543
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
  0.514
POLR2F
RNA polymerase II subunit F.
     
 0.512
BSX
Brain specific homeobox.
    
 0.498
WT1
WT1 transcription factor.
    
 0.483
SLC6A2
Solute carrier family 6 member 2.
      
 0.477
SALL2
Spalt like transcription factor 2.
    
 0.467
ENSAHAP00000010047
annotation not available
    
 0.466
SOX14
SRY-box transcription factor 14.
    
 0.465
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.