STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCC9ATP binding cassette subfamily C member 9. (1553 aa)    
Predicted Functional Partners:
KCNJ11
Potassium inwardly rectifying channel subfamily J member 11.
   
 0.997
KCNJ8
Potassium inwardly rectifying channel subfamily J member 8.
   
 0.996
ABCC8
ATP binding cassette subfamily C member 8.
   
 0.987
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.930
NUDCD1
NudC domain containing 1.
    
   0.884
ENSAHAP00000003427
annotation not available
   
 0.855
SUOX
Sulfite oxidase.
     
 0.733
RAPGEF3
Rap guanine nucleotide exchange factor 3.
    
 0.722
TGS1
Trimethylguanosine synthase 1.
    
   0.646
SLC9A3R1
SLC9A3 regulator 1.
    
 0.646
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.