STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMASCytidine monophosphate N-acetylneuraminic acid synthetase. (438 aa)    
Predicted Functional Partners:
NANS
N-acetylneuraminate synthase.
 
  
 0.996
NANP
N-acetylneuraminic acid phosphatase.
     
 0.953
NPL
N-acetylneuraminate pyruvate lyase.
   
 0.939
ENSAHAP00000021928
annotation not available
   
 0.908
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.778
VPS35
VPS35 retromer complex component.
   
 0.761
VPS26B
VPS26, retromer complex component B.
   
 0.705
VPS26A
VPS26, retromer complex component A.
   
 0.705
SNX5
Sorting nexin 5.
   
 0.704
SNX6
Sorting nexin 6.
   
 0.704
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.