Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001710annotation not available (340 aa)    
Predicted Functional Partners:
CTSH
Cathepsin H.
   
 0.984
CD74
CD74 molecule.
   
 0.981
ENSAHAP00000024635
annotation not available
   
 0.940
CTSB
Cathepsin B.
   
 0.939
ENSAHAP00000003163
annotation not available
   
  0.938
ENSAHAP00000003180
annotation not available
   
  0.938
MMP13
Matrix metallopeptidase 13.
     
 0.937
CTSK
Cathepsin K.
   
  0.929
ENSAHAP00000016313
annotation not available
    
 0.929
CTSA
Cathepsin A.
   
 0.928
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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