STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2. (915 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.987
CTNNA2
Catenin alpha 2.
    
 0.983
ENSAHAP00000007706
annotation not available
    
  0.975
CDH11
Cadherin 11.
   
 0.974
CDH8
Cadherin 8.
   
  0.973
JUP
Junction plakoglobin.
    
 0.973
CDH7
Cadherin 7.
    
  0.973
CDHR1
Cadherin related family member 1.
    
 0.972
CDH23
Cadherin related 23.
    
  0.972
ENSAHAP00000016206
annotation not available
    
  0.972
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.