STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BROXBRO1 domain and CAAX motif containing. (418 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
    
 0.930
CHMP4B
Charged multivesicular body protein 4B.
   
 0.887
CHMP4C
Charged multivesicular body protein 4C.
   
 0.887
STAM2
Signal transducing adaptor molecule 2.
   
 0.751
MVB12A
Multivesicular body subunit 12A.
     
 0.695
MVB12B
Multivesicular body subunit 12B.
     
 0.695
STAM
Signal transducing adaptor molecule.
   
 0.692
ENSAHAP00000012792
annotation not available
    
 0.678
CHMP6
Charged multivesicular body protein 6.
    
 0.666
VPS4B
Vacuolar protein sorting 4 homolog B.
    
 0.661
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.